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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D13G0009 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 688aa MW: 75070.3 Da PI: 8.5109 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.3 | 6.1e-12 | 184 | 246 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kr r+ +NRe+A+ sRqRKk ++eeLe+kv ++ + ++L +++ e a+l++++ Gh_D13G0009 184 EEEEKRKARLLRNRESAQLSRQRKKHYVEELEDKVRTMHSTITDLNNKIAFFMAENATLRQQL 246 6899******************************************99999999999988875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 5.3E-11 | 184 | 246 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.9E-17 | 184 | 248 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.3 | 186 | 249 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.63E-12 | 188 | 246 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-17 | 188 | 247 | No hit | No description |
CDD | cd14704 | 1.90E-20 | 189 | 240 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 688 aa Download sequence Send to blast |
MAESPLEPQM GSELESLAIP PMDPLYLSSD LGFPLDENDD FQLTFDDFDE LYFPSDSDHL 60 IMPDSSGAPA FTSESYVERY LNSSSPGLDS FSGPNSSGNS HSPISSLGSG NCGSAVSDDT 120 NVTSPDSGNN MDQKIDVEEL GKRRVSKRKK GNEETDSIKC RRSSSLLTDN YNSNSDNKLN 180 SLSEEEEKRK ARLLRNRESA QLSRQRKKHY VEELEDKVRT MHSTITDLNN KIAFFMAENA 240 TLRQQLSTGG AGGGSAGMCP PQPVPLPMYP PVAYPWMPCG PPYMMKPPGS QVPLIPIPRL 300 KTQQQSRPAS KAKKNESKTK KVASVSVLGM LFFILLFSGL VPIMNVRYDN TPVGSGPGFV 360 GDGFYEVHRG RVLRVDSHLN RSKYSRDAAF SYGDFNISNR VHGRRSESGG ERKETGAQSA 420 PDYIKNVSEP LTASLYVPRN DKLVKIDGNL IIHSVLASEK ALASHKASER KNKETGLAIP 480 KNFSPALAIP NARENGGKHS REYRNPAERP MALSSGSADA LKDHIRSTAA DGKMQQWFRE 540 GVAGPMLSSG MCTEVFQFDA SAPGAIVPAS SVTTESAKNR QNATQLNKGR NRRILHGHPV 600 PLSRSDLNIT QEHVGRNSGK QNLQGNKTAS SMVVSVLIDP REAGDGDMDD MIVPKSLSRI 660 FVVVLLDSVK YVTYSCGLPR SGLHLVTA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 148 | RRVSKRK |
2 | 579 | 592 | RQNATQLNKGRNRR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.16061 | 0.0 | boll| ovule |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012462424.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A0D2V8N8 | 0.0 | A0A0D2V8N8_G | ||||
STRING | VIT_08s0040g00870.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-155 | bZIP family protein |